A zero one programming model for RNA structures with arclength ≥ 4

نویسندگان

  • G. SHIRDEL University of Qom, Iran
  • N. KAHKESHANI University of Qom, Iran
چکیده مقاله:

In this paper, we consider RNA structures with arc-length 4 . First, we represent these structures as matrix models and zero-one linearprogramming problems. Then, we obtain an optimal solution for this problemusing an implicit enumeration method. The optimal solution corresponds toan RNA structure with the maximum number of hydrogen bonds.

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عنوان ژورنال

دوره 3  شماره 2

صفحات  185- 193

تاریخ انتشار 2012-09-01

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